Published
Peer-Reviewed Journal Articles
- Yang, Junho, Lin Zhu, Mikyoung Jun, and Scott J. Cook. 2025. “On minimum contrast method for multivariate spatial point processes,” Electronic Journal of Statistics, 19(1): 1889-1941. 
- Jun, Mikyoung and Scott J. Cook. 2024. “Flexible multivariate spatio-temporal Hawkes process models of terrorism,” Annals of Applied Statistics , 18(2): 1378–1403. 
- Cook, Scott J., Samantha Zuhlke, and Robin Saywitz. 2024. “Potholes, 311 reports, and a theory of heterogeneous resident demand for city services,” Policy Studies Journal, 52(3): 647-669. 
- Niehaus, John, Lin Zhu, Scott J. Cook, and Mikyoung Jun. 2024. “bizicount: Bivariate Zero-Inflated Count Copula Regression using R,” Journal of Statistical Software, 109(1): 1-42. 
- Cook, Scott J. and David Fortunato. 2023. “The Politics of Police Data: State Legislative Capacity and the Transparency of State and Substate Agencies,” American Political Science Review, 117(1): 280-295. 
- Cook, Scott J., Jude C. Hays, and Robert J. Franzese. 2023. “STADL Up! The Spatio-Temporal Autoregressive Distributed Lag Model for TSCS Data Analysis,” American Political Science Review, 117(1): 59-79. 
- Zhong, Yan, Huiyan Sang, Scott Cook, and Paul Kellstedt. 2023. “Sparse Spatially Clustered Coefficient Model via Adaptive Regularization,” Computational Statistics and Data Analysis, Vol. 177. 
- Cook, Scott J. and Nils Weidmann. 2022. “Race to the Bottom: Spatial aggregation and event data,” International Interactions, 48(3): 471-491. 
- Cook, Scott J. and Clay Webb. 2021. “Lagged outcomes, lagged predictors, and lagged errors: A clarification on common factors,” Political Analysis, 29(4): 561-569. 
- Betz, Timm, Scott J. Cook, and Florian Hollenbach. 2021. “Bias from network misspecification under spatial dependence,” Political Analysis, 29(2): 260-266. 
- Cook, Scott J. and Cameron Thies. 2021. “In plain sight? Reconsidering the linkage between brideprice and violent conflict,” Conflict Management and Peace Science, 38(2): 129-146. 
- Betz, Timm, Scott J. Cook, and Florian Hollenbach. 2020. “Spatial interdependence and instrumental variable models,” Political Science Research and Methods, 8(4): 646-661. 
- Cook, Scott J., Jude C. Hays, and Robert J. Franzese. 2020. “Fixed Effects in Rare Events Data: A Penalized Maximum Likelihood Approach,” Political Science Research and Methods, 8(1): 92-105. 
- Cook, Scott J. and Nils Weidmann. 2019. “Lost in Aggregation: Improving Event Analysis with Report-Level Data,” American Journal of Political Science, 63(1): 250-264. 
- Cook, Scott J., Seung-Ho An, and Nathan Favero. 2019. “Beyond Policy Diffusion: Spatial Econometric Models of Public Administration,” Journal of Public Administration Research and Theory, 29(4): 591-608. 
- Betz, Timm, Scott J. Cook, and Florian M. Hollenbach. 2018. “On the Use and Abuse of Spatial Instruments,” Political Analysis, 26(4): 474-479. 
- Cook, Scott J., John Niehaus, and Samantha Zuhlke. 2018. “A Warning on Separation in Multinomial Logistic Models,” Research & Politics, 5(2): 1-5. 
- Cook, Scott J., Betsabe Blas, Raymond Carroll, and Samiran Sinha. 2017. “Two Wrongs Make a Right: Addressing Misclassification in Binary-Outcome Data from Multiple Sources,” Political Analysis, 25(2): 223-240. 
- Cook, Scott J. and Burcu Savun. 2016. “New Democracies and the Risk of Civil Conflict: The Lasting Legacy of Military Rule,” Journal of Peace Research, 53(6): 745-757. 
- Franzese, Robert J., Jude C. Hays, and Scott J. Cook. 2016. “Spatial- and Spatiotemporal-Autoregressive Probit Models of Interdependent Binary Outcomes,” Political Science Research and Methods, 4(1): 151-173. - Reprinted in Quantitative Research in Political Science: Empirical Methods & Applications (Vol. 4), Robert Franzese, ed., SAGE Major Works. 
 
Book Chapter
- Cook, Scott J., Jude C. Hays, and Robert J. Franzese. 2019. “Model Selection and Spatial Interdependence,” Forthcoming in The Sage Handbook for Research Methods in Political Science & International Relations. 
Book Review
- Cook, Scott J. 2010. “Investing in Protection: The Politics of Preferential Trade Agreements between North and South by Mark Manger.” Review of International Organizations 5(4). 
Work in Progress
Book Manuscript
- Cook, Scott J., Robert J. Franzese, and Jude C. Hays. Empirical Analysis of Spatial Interdependence Under contract with Cambridge University Press. 
Article Manuscripts (Under review)
- “Addressing duplicated data in point process models,” co-authored with Lingling Chen and Mikyoung Jun. 
- “The promise and perils of point process models of political events,” co-authored with Lin Zhu and Mikyoung Jun. 
Major Grants
- PI, National Science Foundation Research Grant (DMS-2413043). “Accounting for geolocation error in point pattern analysis,” with Mikyoung Jun. (Full grant: $199,947; Institutional award: $50,000). Sep 1, 2024 - Aug 31, 2027. 
- Co-PI, National Science Foundation Research Grant (DMS-1925119). “Global Terrorism Threat Detection by Nonstationary, Spatio-Temporal Hawkes Process Models,” with Mikyoung Jun. ($315,999). Sep 1, 2019 - Aug 31, 2023.